dme-mir-954
Changes
| Species | Chrom | Pos | Ref base | Type | A | C | G | T | RNAseq Total | A | C | G | T | Trace Total | Decision | Partition |
| droSim1 | chrU | 391207 | A | 3 | 0 | 0 | 0 | 0 | 0 | 0.222 | 0.778 | 0 | 0 | 9 | Genomic Error | 3' MOR |
Corrected alignment
| Species | Coordinate | Alignment |
|---|---|---|
| dm3 | chr4:646737-646853 + | GACTCATGCA--------------------CGTCT-TACAAACACAAGATTTTCTGGGTGTTGCGTTGTG------------TG--------TACCTGTGTACAGGCGTATTCACATGCA--------ACATCCCTTACATCTTGCTTGATTATACTCCGCCCG---------------------------------------------------------------CC |
| droSim1 | chrU:391095-391211 + | GACGCATGCA--------------------CGTCT-TACAAACACAAGAATTTCTGCGCGTAGAGTTTTG------------TG--------TACATGTGTACGTGCGTATTCACATCCA--------ACATCCCTGACGTCTTGCTTGATTATACTCCGCCCG---------------------------------------------------------------CC |
| droSec1 | super_30:369242-369358 + | GACGCATGCA--------------------CGTCT-TACAAACACAAGAATTTCTGCGCGTAGAGTTTTG------------TG--------TACATGTGTACGTGCGTATTTACATCCA--------ACATCCCTGACGTCTTGCTTGATTATACTCCGCCCG---------------------------------------------------------------CC |
| droYak2 | chr4:700584-700681 + | GACTCATGCA--------------------CGTCTTTACAAACACAAGATATTCTACGCGTTGTGTTTTG------------TG--------TACAT--------------------GCA--------ACATCCCTGACGTCTTGCGCGATTATACTCTGCCCG---------------------------------------------------------------TC |
| droEre2 | scaffold_4512:633126-633238 - | GAGACATGCA--------------------CGTCTTTACAAACACAAGATATTCTGCGCGTTGTGTTTTG-------------ACATGTATGTACAT--------------------GCAACCGTTATGCGTTCCAAGGACCCTATTAGATCGGAACACGGTCA---------------------------------------------------------------GT |
| droAna3 | scaffold_13337:22987804-22987813 + | TCCGCCCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T |
| dp4 | chrXR_group8:8504771-8504835 + | CT----------------------------------TACAAATTCTAGAATTTCTGTCTGTCTGTCTGTCTGTTTTTGTGTGTG--------TATGT----GTGTGTGTGC---------------------------------------------------------------------------------------------------------------------- |
| droPer1 | super_150:7787-7872 - | AATGCATACA--------------------CGATA-TACATACATATGTGTGTGTGTGTGTGTGTGTGTG------------TG--------TGTGTGTGTGTGTGTG----------TA--------GACGTATGTGTAT-----GTGA------------------------------------------------------------------------------- |
| droWil1 | scaffold_181130:1758155-1758267 + | CACTTTTGTG--------------------CTGCG-TGTGAGT----GTGTGTGTGTGAGTTTAAGTGTG------------TG--------TATGTGCGAACATACGAATTTAGATAAA--------GATTCGTATACACATGACATTCGCATACTCACACCT---------------------------------------------------------------AC |
| droVir3 | scaffold_13049:11239836-11239930 - | TACATACGCA--------------------CA----TACATACATAGGTGTTCGTATG----------TA------------TG--------TACGTATGTAGGTGTG--CT---ATACACCCGTCAAAAGAGCTAATTTCCTTTCTTGGTTAT--------------------------------------------------------------------------- |
| droMoj3 | scaffold_6500:15364731-15364841 + | GGGTCAGGCAAATTCGAATGTGAATTCAAAATACA-TACATACATATGTACAT---------GTATTGTG------------TG--------TGCAAGTGTACATGTGTGCTCACATGCA--------AACTCACTTACATAATGTATG-------------------------------------------------------------------------------- |
| droGri2 | scaffold_14822:646607-646724 + | AACAAATGCA--------------------GCGCA-TGT----------------TT------------------------------------------TGATTCACAAGCCTGAACATA--------TCCTAGCATAT------------C------------GTTGGTAACGGGGCTCTGCAGAATACACACACAAACATATTGATGCTCGCGTTGATTATCATGCC |