dme-mir-277

Species Chrom Pos Ref base Type A C G T RNAseq Total A C G T Trace Total Decision Partition
droSim1chr3R15450352A1001010020.100.9010 Genomic Error miR
droSim1chr3R15450356A1001010020.100.9010 Genomic Error miR
droSim1chr3R15450372T3000000.1110.77800.1119 Genomic Error loop
droSim1chr3R15450373G3000000.88900.11109 Genomic Error loop

Corrected Alignment

dme-mir-277

Species Coordinate Alignment
dm3 chr3R:5925729-5925858 + G-ATAAAAT--GCA--TCCT-TTGA--AGGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACTATCTGA-AGCATGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAGGAAA------------------
droSim1 chr3R:15450308-15450437 - G-ATAAAAT--GCA--TCCT-TTGA--AGGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACTATCTGA-AGCATGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAGGAAA------------------
droSec1 super_0:15987777-15987906 - G-ATAAAAT--GCA--TCCT-TTGA--AGGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACTATCTGA-AGCATGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAGGAAA------------------
droYak2 chr3R:9973459-9973588 + G-ATAAAAT--GCA--TCCT-TTGA--AGGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACTATCTGA-AGCATGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAGGAAA------------------
droEre2 scaffold_4770:15674279-15674408 - G-ATAAAAT--GCA--TCCT-TTGA--AGGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACTATCTGA-AGCATGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAGGAAA------------------
droAna3 scaffold_13340:6488981-6489110 + A-GAAAAAT--GCA--TCCT-TTGA--AGGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGA-AGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAAGAAA------------------
dp4 chr2:5020571-5020711 - G-ATTAACTGAGCA--TCCT-TTGA--AGGTTTTGGGTTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGA-AGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAAGACAAATA--TGC-GA------
droPer1 super_19:726018-726152 - G-ATTAACTGAGCA--TCCT-TTGA--AGGTTTTGGGTTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGA-AGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAAGACAAAT---------------
droWil1 scaffold_181089:11168086-11168217 - G-AAAACAA--GCA--TCCTTTTGA--AGGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAAATTTCTAAAAGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCTCGAATGCAAGAAA------------------
droVir3 scaffold_12855:2684186-2684333 - GTATATAGA--GCATATCCT-T-GAGACAGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGAAAGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAAACAA-ATAAATGCTGAAT----
droMoj3 scaffold_6540:11885074-11885210 - T-ATAGCAT-AGCA--TCCTCTTGAGACAGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGA-AGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAACAA--CTAA-------------
droGri2 scaffold_14624:2266182-2266325 + A--TA------TCA--TC-T-TTGAGACAGTTTTGGGCTGCGTGTCAGGAGTGCATTTGCACTGAAACATTCTGAAAGCTTGTAAATGCACTATCTGGTACGACATTCCAGAACGTACAATCTTCCCGAATGCAAGAAA--TAAATGCTGAATAAAC