ID:

dme-mir-9388

Coordinate:

chr3L:22938231-22938293 +

Confidence:

Novel siRNA

Type:

intergenic

[View on UCSC Genome Browser]

Legend:

mature

star

mismatch in read

Predicted structure

Sense Strand Reads

CCGAAGTGCAGCGTATTCTGCCAAGAAACGCTATCCAAGTATTTTGGTACGTATGTATGTATGTACATACATGTGTATATGGTACATTCATGTAGTACATACATACATATGTATGCAAGTACGTACGAACGCTCGACAATTCCTCTGCTAAAACCAAATGCGA *********************************...((((((..((((((((((((((((((((.(((((((((((...)))))..))))))))))))))))))))))))))..)))))).....**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRX247213 FLAG-IP from S2-R+, FLAG-HA-AGO2 AGO2	V145 S2-DRSC cellline	V148 mbn2 cellline	SRR341117 transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation	V074 S3 cellline	V008 S2-DRSC cellline	SRR032092 mock oxidized	V128 S3 cellline	SRR341116 transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation	GSM343833 S2R+ cell cellline	GSM371638 S2-NP cellline	V073 mbn2 cellline	SRR032093 ago1 knockdown	SRX247212 AGO1-IP from S2-R+, FLAG-HA-AGO2 AGO1	SRR029028 untreated (mock)	GSM609218 Sg4 cellline	GSM343832 S2R+ cell cellline	V125 ML-DmD9 cellline	SRR097866 Drosophila S2-NP cells	GSM609242 s2+48 #2	SRR097865 Drosophila S2-NP cells	SRR029030 dcr-2 knockdown	GSM280087 S2cell (AGO2IP) AGO2	SRR097867 Drosophila S2-NP cells	SRR029032 r2d2 knockdown	M005 ML-DmD32 cell cellline	SRR029033 lacZ knockdown	V133 Sg4 cellline	GSM609241 s2+48 #1	SRR032094 ago2 knockdown	GSM609235 CMEL1 cellline	SRR029029 dcr-1 knockdown	GSM272652 S2 -48 Biological Replicate #1	SRR341115 transfected with dsRNA targeting nibblercell type: Schneider 2 (S2) cellsoxidation	GSM361908 s2-48 Biological Replicate #2	SRR031693 2'-O-methylated small RNAs from Oregon R	SRR341118 transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation	GSM280088 S2cell (AGO1IP) AGO1	SRR032095 AGO1 IP dcr2 knockdown AGO1	V147 1182-4H cell cellline	V146 S1 cell cellline	SRR032096 AGO2 IP dcr2 knockdown AGO2	SRR029031 loqs-ORF knockdown	GSM609248 ML-DmD9 cell cellline	SRR023197 RNA Library from S2 control cells	GSM239051 S2 cells, beta-eliminated AGO2	V126 CME L1 cellline	SRR031694 2'-O-methylated small RNAs from Oregon R	V085 CME W2 wing disc cellline	GSM312995 WT, oxidized	SRR317113 genotype: CG47711-delta1/CG4771-delta1stage: from 5-6 days old flies	GSM609247 heat female head	M006 ML-DmD32 cellline	SRR023400 total RNA extracted from P19 cells	GSM272651 S2-48,+48, KC-48, +48 mix	GSM609221 1182-4H cell cellline	V134 ML-DmD8 cellline	SRR023399 RNA bound by P19 protein AGO2	SRR031698 2'-O-methylated small RNAs from dcr-2 heterozygous flies	GSM424740 S2 pKF63 stably transfected	GSM609249 ML-DmD21 cell cellline	GSM313161 dcr-2 heterozygous, oxidized	GSM609250 ML-DmD32 cell cellline	SRR317112 genotype: CG4771-delta1/TM3Sbstage: from 5-6 days old flies	V131 ML-DmD16-c3 cellline	V034 ML-DmD16c3 cell cellline	V127 G2 cellline	GSM609226 CMEW1 Cl.8+ cell cellline	GSM628271 r2d2[1] ovary total RNA	GSM609227 CMEW1 Cl.8+ cell cellline	GSM609225 ML-DmBG3-C2 cellline	V132 ML-DmD32 cellline	SRR023402 total RNA extracted from NLS-P19 cells	SRR023407 RNA bound by NLS-P19 protein AGO2	GSM609217 MLDmD20c5 cellline	SRR031697 Total small RNAs from dcr-2 heterozygous flies	V030 ML-DmD8 cell cellline	GSM609222 ML-DmBG1-C1 cellline	V022 ML-DmD32 cell cellline	V135 CME W2 (wing disc line) cellline	GSM609220 ML-DmD21 cell cellline	V032 S1 cell cellline	SRR317117 genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies	SRR031702 2'-O-methylated small RNAs from r2d2 heterozygous flies	GSM385748 OSS_s6 cellline	GSM399110 KC-48 #2	GSM385744 OSS_s2 cellline	GSM313163 dcr-2 heterozygous, untreated	GSE24544 dcr-2[L811fsX] ovary total RNA	SRR031699 Total small RNAs from dcr-2 homozygous flies	V036 ML-DmD20c5 cell cellline	GSM239052 S2 cells, non beta-eliminated	GSM609232 r2d2[1] ovary total RNA	SRR351332 age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: control wild type (w, 5905)	GSM385821 OSS_s7 cellline	GSM609236 dcr-2[L811fsX], ovary, AGO1IP AGO1	SRR031692 Total small RNAs from Oregon R	GSM385822 OSS_s8 cellline	GSM609238 embryo 14-24hr	GSM399101 kc167 cell cellline	SRR029633 total small RNAs from hen1 homozygous flies	SRR031700 2'-O-methylated small RNAs from dcr-2 homozygous flies	GSM313160 dcr-2 homozygous, oxidized	GSM609233 r2d2[1], ovary, AGO1IP AGO1	GSM313162 dcr-2 homozygous, untreated	SRR029608 total small RNAs from hen1 heterozygous flies	GSM180337 tissue culture cells (S2 only)	GSM379052 Aub Heterozygote	GSM609230 CS,ovary,AGO1IP AGO1	GSM399100 Kc167 cell cellline	SRR060647 A2_ovaries_FLAG-Ago2 AGO2	GSM286604 0-1h #3 (7)	GSM609229 embryo 2-6hr	GSM313164 ago2 homozygous, oxidized (technical replicate #1)	GSM313165 ago2 homozygous, oxidized (technical replicate #2)	SRR031703 Total small RNAs from r2d2 homozygous flies	GSE24545 CS ovary total RNA	GSM322543 male head #1	GSM609231 ago2[414], ovary, AGO1IP AGO1	V130 ML-DmBG3-c2 cellline	GSM286605 2-6h #1 (8)	GSM286613 0-1hr #1 (A)	GSM609240 IR+	SRR001345 ago2_non-beta-eliminated	GSM286611 6-10h #2 (11)	GSM609239 IR-	SRR001349 heterozygous_dcr-2_untreated	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM379060 SpnE Heterozygote	SRR014276 Ovary_rep1_NA(fem)_x_Har(male)_F1	SRR014279 Ovary_rep1_w1118(fem)_x_wK(male)_F1	SRR014281 Ovary_rep1_wK(fem)_x_w1118(male)_F1	GSM628272 ago2[414] ovary total RNA	SRR060652 hs-Penelope_testes_total	V091 fGS/OSS total � cellline	V031 GM2 cell cellline	GSM272653 KC -48 #1	V144 OSC cellline	SRR351333 age: 2-3dgender: male:female = 1:1tissue: whole flygenotype: nbr[f02257]	SRR014270 Embryo_0-2hrs_rep1_NA_0_2hr_Emb	SRR014272 Embryo_0-2hrs_rep1_wK_0_2hr_Emb	GSM322533 female head #1	SRR001664 homozygous_dcr-2_untreated	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR031704 2'-O-methylated small RNAs from r2d2 homozygous flies	GSM609251 aged female head	GSM379056 Krimp Heterozygote	GSM379057 Krimp Mutant	GSM379063 Vasa Heterozygote	GSM379066 Zuc Mutant	SRR010954 Aub trans-heterozygotes, oxidized	SRR014280 Ovary_rep1_w1118_P	SRR060644 A2_ovaries_total	SRR298536 strain: vret148-60/TM6genotype/variation: Vret Heterozygote	SRR298537 strain: vret148-60/vret148-60genotype/variation: Vret Mutant	SRR317111 genotype: DF(3L)armi-delta1/DF(3L)armi-delta1Stage: from 5-6 days old flies	SRR317114 genotype: fs(1)yb_72/Fm6 or fs(1)yb_4/Fm6stage: from 5-6 days old flies	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 AGO2	GSM379055 Flam Mutant	GSM286606 2-6h #2 (9)	SRR014268 Embryo_0-2hrs_rep1_HAR_0_2hr_Emb	SRR014269 Embryo_0-2hrs_rep1_LK_0_2hr_Emb	GSM360260 0-1d Pupae (w)	GSM399107 male body #2	GSM286602 male body	SRR032152 Ago1-associated small RNAs from Oregon R AGO1	GSM240749 female head	SRR001338 IR_non-beta-eliminated	SRR001347 ago2_untreated	GSM379050 Armi Heterozygote	GSM379058 Piwi Heterozygote	GSM379061 Squ Heterozygote	GSM379062 Squ Mutant	GSM379064 Vasa Mutant	SRR010953 Aub heterozygotes, oxidized	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR014273 Ovary_rep1_Har_P	SRR014274 Ovary_rep1_LK(fem)_x_Har(male)_F1	SRR014275 Ovary_rep1_LK_P	SRR014277 Ovary_rep1_NA_P	SRR065800 zuc_H-Y_ovaries	SRR317110 genotype: Df(3L)armi-delta1/TM3SbStage: from 5-6 days old flies	SRR317115 genotype: fs(1)yb_72/fs(1)yb_4stage: from 5-6 days old flies	SRR317116 genotype: zuc_hm27/Cyo or zuc_cd761/Cyostage: from 5-6 days old flies	GSM609237 ago2[414] ovary total RNA	GSM399105 disk #2	GSM609243 KC+48 #1	GSM609244 KC+48 #2	V129 ML-DmBG1-c1 cellline
..........................................................................................TGTAGTACATACATACATATGT...................................................	22	0	1	113039.00	113039	38172	13305	12066	4230	4327	3370	3373	2995	2414	2604	2148	2112	1842	1675	1594	1516	1434	1275	853	573	739	688	680	577	546	538	502	517	373	417	416	333	344	259	187	238	204	207	205	190	169	168	149	142	127	115	123	89	91	73	69	72	68	55	46	52	52	50	44	46	44	40	40	38	38	38	37	36	32	34	30	32	17	29	30	25	27	26	23	22	22	22	17	15	20	18	16	19	17	9	16	11	14	10	14	14	12	10	12	12	4	9	8	10	9	9	8	8	8	8	7	7	7	7	7	4	6	2	6	6	5	5	4	3	1	3	2	3	3	3	3	3	3	3	3	3	3	3	2	2	2	2	1	1	2	2	2	2	2	2	2	2	2	2	2	2	2	2	1	1	1	1	1	1	1	1	1	0	0	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1
..........................................................................................TGTAGTACATACATACATATG....................................................	21	0	1	1459.00	1459	325	8	11	180	11	14	0	5	287	16	6	4	32	5	27	6	16	3	2	92	3	40	0	3	19	2	0	1	106	23	0	27	19	15	22	3	23	0	0	0	1	0	1	0	0	9	0	4	2	4	10	0	0	4	5	0	0	0	5	0	0	0	0	1	0	0	0	0	0	0	2	0	5	1	0	3	0	0	0	0	0	0	3	5	0	0	2	0	0	6	0	4	0	4	0	0	1	0	0	0	6	2	2	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATACATACATATGTT..................................................	23	1	1	1346.00	1346	347	126	72	7	50	160	0	7	2	56	54	10	6	124	11	54	44	0	3	30	9	13	0	5	32	1	8	2	9	29	6	12	8	2	3	1	3	8	2	0	1	0	2	2	0	3	0	1	0	0	0	2	2	0	0	0	0	1	0	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	3	2	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GTAGTACATACATACATATGT...................................................	21	0	1	1079.00	1079	743	50	25	22	23	35	9	14	9	24	16	7	10	10	1	2	12	1	0	1	2	0	0	9	0	2	0	4	0	4	8	0	1	3	0	4	0	0	2	0	1	0	5	0	1	0	0	4	1	4	0	2	0	1	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GTAGTACATACATACATATGTA..................................................	22	0	1	950.00	950	501	133	76	0	36	28	16	13	0	2	4	8	7	5	6	8	20	4	5	2	2	0	2	5	6	0	26	4	0	0	4	11	0	0	0	0	0	0	0	1	0	2	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATACATACATATGC...................................................	22	1	1	797.00	797	480	44	35	6	50	19	26	7	4	8	14	34	4	4	9	0	6	7	1	4	4	1	1	3	4	0	0	2	4	0	2	0	1	1	0	0	0	1	2	1	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTATGTATGTATGTACATACATG..........................................................................................	23	0	2	489.00	978	536	0	0	2	9	3	0	0	0	0	2	1	11	2	8	0	8	0	4	196	0	13	3	0	6	0	6	0	39	4	0	9	2	0	97	0	0	0	0	0	0	0	2	0	0	0	0	0	3	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGGAGTACATACATACATATGT...................................................	22	1	1	459.00	459	29	3	34	68	96	54	8	2	43	18	26	30	2	0	1	6	16	2	0	1	0	0	0	0	0	2	0	0	0	0	6	0	1	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................CTGTAGTACATACATACATATGT...................................................	23	1	1	418.00	418	318	12	12	0	4	9	21	1	0	8	2	3	1	1	0	2	6	2	1	0	2	0	3	1	2	0	0	0	0	0	2	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGGACATACATACATATGT...................................................	22	1	2	355.50	711	128	4	80	30	182	39	5	5	21	26	50	63	2	1	2	6	12	13	0	0	0	0	0	0	0	1	0	0	4	0	8	0	0	1	0	0	1	0	0	1	0	4	0	2	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	6	0	0	0	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATACATACACATGT...................................................	22	1	1	355.00	355	71	23	23	2	13	7	56	11	1	8	4	9	16	4	20	8	4	9	5	0	3	5	3	3	3	1	0	1	3	20	0	1	0	1	2	2	0	1	0	0	0	1	3	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GTAGTACATACATACATATGTT..................................................	22	1	1	321.00	321	236	18	8	0	3	23	0	0	2	2	2	1	0	9	2	4	2	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..........................................................................................TGTAGTACATACATACATATC....................................................	21	1	2	3.00	6	5	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATGCATGCATATGT...................................................	22	2	1	3.00	3	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACTCACATACATATGT...................................................	22	2	1	3.00	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGGAGTACATACATACATAGGT...................................................	22	2	2	3.00	6	0	0	0	1	2	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GTAGTACGTACATACATATGTA..................................................	22	1	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GTAGTACAGACATACATATGTA..................................................	22	1	1	3.00	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATTCATGCATATGT...................................................	22	2	1	3.00	3	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AATGTAGTACATACATACATATGT...................................................	24	1	1	3.00	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTATGTATGTATGTACATACATGT.........................................................................................	24	0	1	3.00	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATAAATAAATATGT...................................................	22	2	1	3.00	3	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATACAGACATATG....................................................	21	1	1	3.00	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GTAGTACATACATACATCTGT...................................................	21	1	1	3.00	3	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACTTACATACCTATGT...................................................	22	2	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACTTACATACATATGG...................................................	22	2	1	3.00	3	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GTAGTACATACATACACATGTA..................................................	22	1	1	3.00	3	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGTACATACATCCAGATGT...................................................	22	2	1	3.00	3	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................CTGTAGTACATACCTACATATGT...................................................	23	2	1	3.00	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Anti-sense strand reads

CCGAAGTGCAGCGTATTCTGCCAAGAAACGCTATCCAAGTATTTTGGTACGTATGTATGTATGTACATACATGTGTATATGGTACATTCATGTAGTACATACATACATATGTATGCAAGTACGTACGAACGCTCGACAATTCCTCTGCTAAAACCAAATGCGA *********************************...((((((..((((((((((((((((((((.(((((((((((...)))))..))))))))))))))))))))))))))..)))))).....**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR097866 Drosophila S2-NP cells	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR317117 genotype: zuc_hm27/zuc_cd761stage: from 5-6 days old flies	V135 CME W2 (wing disc line) cellline	V148 mbn2 cellline	V131 ML-DmD16-c3 cellline	SRR341116 transfected with dsRNA targeting luciferasecell type: Schneider 2 (S2) cellsoxidation	GSM272652 S2 -48 Biological Replicate #1	SRR032096 AGO2 IP dcr2 knockdown AGO2	V128 S3 cellline	V132 ML-DmD32 cellline
...............................................................................................................................AACTCTTCACAATTCCTCTGCTA.............	23	3	1	56.00	56	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ACTCTTCACAATTCCTCTGCTA.............	22	3	3	18.67	56	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................CAAGTACGTACGAACGCT..............................	18	0	1	5.00	5	4	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................AACGCTTCACAATTCCTCTTCTA.............	23	3	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ACTCTTAACAATTCCTCTGCTA.............	22	3	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................ACTCGACAATTCCTCTGCTAAAACC........	25	1	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................AACCCTTCACAATTCCTCTGCTA.............	23	3	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0
.......................AGAAACGCTATCCACGCA..........................................................................................................................	18	2	3	1.33	4	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................CTCTTCACAATTCCTCTGCTA.............	21	3	11	1.18	13	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................GGTACGACCGCTCGTCAATTCC....................	22	3	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GAACGCTCGACAATTCCTCTGCT..............	23	0	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0
................................................................................TTTACATTCATGTAGTACATACATA..........................................................	25	2	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CACAATTCCTCTGCTCAGACCA.......	22	3	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
.................CTGCCAAGAAACGCTATCCAAGT...........................................................................................................................	23	0	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
................................................................................................................................ACGCTTCACAATTCCTCTGCTA.............	22	2	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
....AGGGCAGGGTATTCTGCCAAGC.........................................................................................................................................	22	3	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................GCAAGTACGTACGAACGCTCG............................	21	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................CGAACGCTCGACAATTCCTCTGCT..............	24	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
........CAGCGTATTCCGCCAAGAAACG.....................................................................................................................................	22	1	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
..............................................................................................................................GACCGCTCGACCATTCCTCT.................	20	2	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ACGCTTCACAATTCCTGTGCTA.............	22	3	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................CTTGTGTATATGGTATATTCA.........................................................................	21	2	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TACGAACGCTCGACAATTCCT...................	21	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................ACGTACGAACGCTCGACAATT......................	21	0	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................TCATGTAGTACATACATACATATGTAT.................................................	27	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................CCAAACTACGCTATCCAAGTA..........................................................................................................................	21	3	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................CATGTGTATACGGTTCATCCA.........................................................................	21	3	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0
.........AGCCTACTCTGCCGAGAAACG.....................................................................................................................................	21	3	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
................................ATCGAAGTATTCCGGTACGT...............................................................................................................	20	3	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GAACGCTCGACAATTCCTCTG................	21	0	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0
.......................AGAAACGCTATCCAAGCA..........................................................................................................................	18	1	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................CGACAATTCCTCTCCGAACAC.........	21	3	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCTCGACAAATCCTCTGCTCG............	21	3	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................CCCTCGACAGTTGCTCTGCTA.............	21	3	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................CGAACCCTCGACCATTC.....................	17	2	20	0.55	11	0	0	0	0	0	0	0	0	0	0	0
...................CCCAAGAAACGCCATCCAA.............................................................................................................................	19	2	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................AACTCTCCAAAATTCCTCTGCTA.............	23	3	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0
CCGTAGTGCAGCTTAATCTGC..............................................................................................................................................	21	3	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCTTCACAATTCCTCTGCTA.............	20	2	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................CCCTCAACAATTCCCCTGCTA.............	21	3	4	0.50	2	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................GCCAATTCCTCTCCTAAACCC........	21	3	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0
...............................AATCCAAGTATTCTCGTACGT...............................................................................................................	21	3	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................TGTATGCTAGTACGTACGCAC.................................	21	2	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0
.......................AGAAACGCTATTCAAGCA..........................................................................................................................	18	2	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0
............................................................................ACATACTACATTCATGTAGTA..................................................................	21	3	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0
........................................ATTTTGGTCCGTATTTATGAA......................................................................................................	21	3	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0
.......................AGAAACGCTATCCAACCA..........................................................................................................................	18	2	15	0.40	6	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................CCCTTAACAATTCCTCTGCTA.............	21	3	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0
.CGAAGTGTAGCGTATTCC................................................................................................................................................	18	2	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................TCCTCAGGTAAAACCCAATG...	20	3	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0
.........AGCCTATTCTACCACGAAACG.....................................................................................................................................	21	3	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................TAATGCTCGACATTTCCTCT.................	20	3	6	0.33	2	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................AATTCCTTTCCTACAACCAAA.....	21	3	3	0.33	1	0	0	0	0	0	0	0	0	1	0	0
........CAGCGTCTTCTCCCGAGAAAC......................................................................................................................................	21	3	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0
.......................AGAAACGCAATCCAAGCA..........................................................................................................................	18	2	10	0.30	3	0	0	0	0	0	0	0	0	0	0	0
...........................ATTCTATCCAAGTGTTTTGGT...................................................................................................................	21	3	7	0.29	2	0	0	0	0	0	0	0	0	0	0	0
...................................TCAGTATTTTGGTTCGTATGT...........................................................................................................	21	3	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................AAGCACGAATGCTCGACAATT......................	21	3	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................CGACAATATCTCTGATAAAAC.........	21	3	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................CAGACATATGTATTCAAGGAC.........................................	21	3	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TAGGACGTACGAACGCTGG............................	19	3	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
.......................AGATACGCTATCCAAGCA..........................................................................................................................	18	2	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................ACCATTCCTCTGCTCAGACCA.......	21	3	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................GCACGCTCGACAATTCTT...................	18	2	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................GTACGTTCATGTGTATCTGG.................................................................................	20	3	10	0.20	2	0	0	0	0	0	0	0	0	0	0	0
.................................................CGTATGTATGTATTTACATACA............................................................................................	22	1	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CATTCATTTATTACATACA............................................................	19	2	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................TCCTCTTCTAAAATCAAAT....	19	2	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CTCGACAATTCCACTGCCATA...........	21	3	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0
.......................AGAAACACTATCCAAGCA..........................................................................................................................	18	2	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0
......................AAGAAACACAATCCAAGTATA........................................................................................................................	21	3	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0
.......................AGGAACGCTATCCAACTACT........................................................................................................................	20	3	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................AGAATTCATCTGATAAAACCA.......	21	3	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0
.......................AGAAACGTTATCCAAGCA..........................................................................................................................	18	2	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................CACTCGACAATTTCTCTGCG..............	20	3	6	0.17	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................AGGTGCGAACGCTCGACC.........................	18	3	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................AGTACTTACGACCGCCCGA...........................	19	3	7	0.14	1	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TTCATCTATTTCATACATACA........................................................	21	3	15	0.13	2	0	0	0	0	0	0	0	0	0	0	0
...............................................................TACATACATGTTAATATGGCA...............................................................................	21	3	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0
................TCCGCCAAGCAACGCAATCC...............................................................................................................................	20	3	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................AGTAGGAAGGCTCGACAAT.......................	19	3	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGTAGGAAATACATACATATGT...................................................	22	2	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0
.......CCCGCGTATTCTGCCAAGC.........................................................................................................................................	19	3	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0
.................................TCGAAGTATTCCGGTACGT...............................................................................................................	19	3	8	0.13	1	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ACGTTCGCCGATTCCTCTGC...............	20	3	9	0.11	1	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TGAAGTACATACATACATCTG....................................................	21	2	10	0.10	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TTCCACTGCTAAACCAAAAT....	20	3	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................TCTGCTAAAATCAAATTCT.	19	3	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0
......................AGGAAACTCTAACCAAGTAT.........................................................................................................................	20	3	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................AAGCACGAACGCTCGACAT........................	19	3	11	0.09	1	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ACGCTCCACAAGTCCTC..................	17	2	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0
.............................................GGTACGTACGTATGTATTTA..................................................................................................	20	2	13	0.08	1	0	0	0	0	0	0	0	0	0	0	0
.....................CACGAAACGCTAACCACGT...........................................................................................................................	19	3	13	0.08	1	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................ACATATATATGTATGCTAGTA..........................................	21	2	13	0.08	1	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................GACGCTCGTCAATCCCTCT.................	19	3	14	0.07	1	0	0	0	0	0	0	0	0	0	0	0
................................................ACGTATGTATGTATGTAC.................................................................................................	18	0	15	0.07	1	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................AGTAAGTACGAACCCACG............................	18	3	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0
.........AGCCTATTCTACAAAGAAAC......................................................................................................................................	20	3	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................AGGCCGTACGAACGCGCG............................	18	3	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0
...............TTCTGGCAAGCAACCCTAT.................................................................................................................................	19	3	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................ACATAAGTATGCATGTACGTCC.....................................	22	3	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................ACGCTTCACAATTCCTCTTCTA.............	22	3	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................ACGGACAAACGCTTGACAAT.......................	20	3	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CTCGACAATTCCTCCTC...............	17	2	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0
..........................................TTTGGAACGTATGTATGCATA....................................................................................................	21	3	18	0.06	1	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................CACGTACGAACGATCGAT..........................	18	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0
.......CGCGCGTATTCTGCCAAG..........................................................................................................................................	18	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................TTCCTCTGCTGAAATCCAAT....	20	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................CGAGCGCTCGACAATGCCA...................	19	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................AGTAACGACGAACGCTCG............................	18	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CTTAACACTTCCTCTGCTA.............	19	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0
....................................TAGTATTTTAGTCCGTATG............................................................................................................	19	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................GTCCTCTCCTAAAACTAAAT....	20	3	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0

Generated: 08/20/2013 at 10:02 AM